INSTALL GALAXY TOOLS

Go back to your Google ssh terminal

• Run the following script using the bash interpreter:

  source /root/.bashrc && \
  bash /root/AnalyseGenome/GalaxyServer/install_galaxy_tools.sh
  

  You should now be asked for an API key:

  please enter your admin API key: 
  

  The next section explains how to generate and copy this API key to interact programmatically with the Galaxy server and be able to install tools

Go back to your Galaxy web window

In the main menu User → Preferences

Select Manage API Key, click Create a new Key, and copy the current API key

Paste the copied API key in the Google ssh terminal

and press the Enter key

The tool installation should start immediately and lasts about 15 minutes (you should see tools installing one at a time)

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