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In Case of bad issue or impossibility of deploying your instance with the instructions in this manual, we have provisioned an Image of a VM which is equivalent to the one you should be able to build during the training.

At any time you can deployed this Galaxy server, and the instructions to do it are bellow.

However, to be able to access to this image, you must provide the Gmail address which is necessarily associated to your project/billing account (even if your academic email address was required to obtain you Google coupon).

Remember: to see the VM Image which will be used here to deploy a Galaxy server, send me, or provide me by any mean (Slack, GitHub, etc.), your Gmail adress identifier.

Starting a new VM instance from the image analyse-genomes-v6

1. open the form for creating an instance

This will be mostly done as in this section which we are reproducing bellow, except that for the Disque de démarrage (Boot disk), we are not going to choose IMAGES PUBLIQUES/PUBLIC IMAGES :

Google Instance from the Image analyse-genomes-v6

  • Name: ansible-galaxy
  • Region europe-west6 (Zurich) (or any region available with you Google coupon)
  • Zone: europe-west6-a (or -b or -c)
  • Configuration de la machine
    • OPTIMISEE POUR LE CALCUL (or USAGE GENERAL)
    • Série: C2
    • Type de machine: c2-standard-16 (16 processeurs virtuels, 64 Go de mémoire)
  • Disque de démarrage Here, this is changing
    • This time, select the tab CUSTOM IMAGES/IMAGES PERSONNALISÉES
    • Click the button SELECT A PROJECT:SELECTIONNER UN PROJET
    • Click on the tab ALL: A this stage you should see the project of your instructor Analyse Genome Coupon 1, if, and only if you provided him with your Gmail address identifier of your project, and if he did not forget to record it 😇
    • Select Analyse Genome coupon 1
    • Now if you drop-down the menu Image *, you should immediately be able to select analyse-genome-v3 (Created on nov. 28, 2021, 12:08:27) (or another version if I upgraded the image)
    • Automatically, the boot disk type should be Balanced persistent disk and the Size (GB) should be 200. Leave it that way.
    • SELECTONNER/SELECT (no need to modify the advanced configuration)
  • Pare-feu (Do not forget, back to the main instance panel)
    • Check Autoriser le trafic HTTP/Allow HTTP traffic
  • Click on the CREATE/CREER button !

2. Deploy !

Your VM should take just a little more time to deploy, otherwise it is like the start of a regular VM instance.

Using this Image, you will benefit from already provisioned (and uncompressed) references, small RNA datasets and RNA datasets, as well as already buit dataset collections !

💅

⚠ Do not forget to attach your static IP address to this VM (as described here) if you wish to use it for your analyses.