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Generate workflow from an history

1. select the "extract workflow" item in the history menu

2. Uncheck and rename before workflow extraction

3. Edit workflow

step 2: reconnect tools, starting from the input data collection

Warning

When reconnection, you may have the warning 

Can't map over this input with
output collection type - an output
of this tool is not mapped over
constraining this input.
Disconnect output(s) and retry.
This is a bug and You may need to manipulate a little the workflow editor before being able to reconnect the input data collection box to the Map with BWA-MEM tool box. Try to save the unlinked workflow, quit and reedit, or manipulate the Collection type parameter of the input data collection box, by clearing the field and re-entering list:paired. After a while it will go... ```

step 3: edit the last step of the workflow to rename the output