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Lumpy approach
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Interactive Online Companionship (IOC)
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STARTbio
ARTbio/startbio
Home
Interactive Online Companionship (IOC)
1Omin2
Galaxy Trainings
Galaxy Trainings
Analyse des Génomes (2024)
Run your Galaxy server
Run a Galaxy workflow for somatic mutation detection in cancers
Search for chomosome translocations
Search for chomosome translocations
Introduction
Sequencing Protocol
Lumpy approach
Lumpy approach
Table of contents
Lumpy algorithm
Trainee connection
Prepare the input data history
Align reads to the human genome
lumpy analysis
Reformat VCF files for visualization in the UCSC genome browser
Compute the genome read coverage
Data Visualisation in UCSC Genome Browser
Generate workflow from an history
Run the Lumpy workflow
Reference-based RNAseq analysis
Viruses Metagenomics
Download TARGET-AML Data in Galaxy
Code Snippets
Links
Table of contents
Lumpy algorithm
Lumpy approach
Lumpy algorithm
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