Various aspects of sequence data mining
Read Mapping, Counting & Visualization¶
-
- Information Technologies & biotools
-
- understanding of annotation formats
Quantitative profiling (RNAseq, single-cell RNAseq, chromatin IPs, …)¶
Sequence and Structure analyses (Variant, signatures, 3D conformations, …)¶
-
- Requires Tools for Statistics (R, Python)
-
- Math. Methods: Tests Univariate or Multivariate, Classification, Regression, Dimensional reduction, etc...