Volcano Plot create a volcano plot


  1. Select the Volcano Plot create a volcano plot tool with the following parameters:
    • Specify an input file: the DESeq2 result file
    • FDR (adjusted P value): Column: 7
    • P value (raw): Column: 6
    • Log Fold Change: Column: 3
    • Labels: Column: 1
    • Points to label: Significant
      • Only label top most significant: 15
    • Plot Options:
      • Label Boxes: No
      • Labels for Legend: Down,NotSig,Up
  2. Execute

You should obtain something like :