Mouse Genetics - deep seq analysis training

Feb 1st 2019

In this training session, we are going to analyse 2 datasets from two patients in order to find translocations between BCR (chr22) and ABL1 (chr9).

We will visualize the coverage of these two genes by the datasets sequencing reads.

We will use the tool lumpy to find putative translocations sites in patients genomes and we will visualize the position of these sites in the genome.

This training manual is available in a better resolution as a Google Slide doc